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CH Instruments recombination detection program v3
Recombination Detection Program V3, supplied by CH Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/recombination+detection+program/rdp3/pmc11545274-141-15-6
Average 90 stars, based on 1 article reviews
recombination detection program v3 - by Bioz Stars, 2026-09
90/100 stars

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Article Title: Evolutionary dynamics of bipartite begomoviruses revealed by complete genome analysis
Article Snippet: Recombination analysis was performed using the Rdp, Geneconv, Bootscan, Maximum Chi Square, Chimaera, SisterScan and 3Seq methods implemented in Recombination Detection Program (RDP) v. 4 ( ).

Article Title: Characterization of Tomato leaf curl New Delhi virus associated with leaf curl and yellowing disease of Watermelon and development of LAMP assay for its detection
Article Snippet: Recombination analysis was carried out using the Recombination Detection Program (RDP), GENECOV, Bootscan, Max Chi, Chimaera, Si Scan, and 3Seq which are integrated in RDPv 4.46 (Martin et al. 2015 ).

Article Title: Characterization of recombinant tomato leaf curl Palampur virus causing leaf curl disease of Basella alba L. in India
Article Snippet: Malabar spinach (Basella alba L.), a leafy vegetable native to the Asian and African continents, was observed with rosetting and curling of leaves associated with begomovirus infection.. PCR assay involving the universal begomovirus specific primer pair was used to detect the viral infection.. Subsequently, the circular DNA molecules associated with the infected samples were enhanced through rolling circle amplification (RCA).

Article Title: Association of tomato leaf curl New Delhi virus DNA-B with bhendi yellow vein mosaic virus in okra showing yellow vein mosaic disease symptoms.
Article Snippet: Further, recombination analysis was carried out using recombination detection program (RDP), GENECOV, Bootscan, Max Chi, Chimara, Si Scan, 3Seq which are integrated in RDP3 to detect the recombination break points (Martin et al., 2010).

Article Title: Association of Tomato Leaf Curl New Delhi Virus, Betasatellite, and Alphasatellite with Mosaic Disease of Spine Gourd ( Momordica dioica Roxb. Willd) in India
Article Snippet: Recombination analysis was carried out using the recombination detection program (RDP), GENECOV, Bootscan, Max Chi, Chimera, Si Scan, 3Seq which are integrated in the RDP4 ( ).

Article Title: High molecular diversity and divergent subpopulations of the begomovirus cnidoscolus mosaic leaf deformation virus associated with Cnidoscolus urens.
Article Snippet: Begomoviruses have circular, single-stranded DNA genomes encapsidated into twinned quasi-icosahedral particles and are transmitted by whiteflies of the Bemisia tabaci sibling group.. Begomoviruses infect cultivated and non-cultivated plants, causing great losses in economically important crops worldwide.. To better understand the genetic diversity of begomoviruses infecting the non-cultivated host Cnidoscolus urens, leaf samples exhibiting virus-like symptoms were collected in different localities in the state of Alagoas, Brazil, during 2015 and 2016.

Article Title: Complete genome sequence of a previously undescribed monopartite begomovirus and betasatellite infecting Malvastrum coromandelianum in Cambodia.
Article Snippet: Recombination analysis was carried out with default settings in Recombination Detection Program (RDP) 4.0, using the GENECOV, Max Chi, RDP, Bootscan, Chimaera, 3Seq, and SiSan algorithms [24], but no recombination events were detected in MaYVCV.



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Simplot Science recombination detection program rdp analysis
<t>Recombination</t> trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see <xref ref-type=Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis. " width="250" height="auto" />
Recombination Detection Program Rdp Analysis, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Simplot Science recombination detection program
<t>Recombination</t> trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see <xref ref-type=Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis. " width="250" height="auto" />
Recombination Detection Program, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Simplot Science recombination detection program rdp
<t>Recombination</t> trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see <xref ref-type=Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis. " width="250" height="auto" />
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Simplot Science recombination detection program (rdp)
Genetic <t> recombination </t> events of GNU-2353 and GNU-2377 detected by RDP4 software.
Recombination Detection Program (Rdp), supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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CH Instruments recombination detection program v3
Genetic <t> recombination </t> events of GNU-2353 and GNU-2377 detected by RDP4 software.
Recombination Detection Program V3, supplied by CH Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/recombination+detection+program/rdp3/pmc11545274-141-15-6
Average 90 stars, based on 1 article reviews
recombination detection program v3 - by Bioz Stars, 2026-09
90/100 stars
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Simplot Science recombination detection program v4.45
Genetic <t> recombination </t> events of GNU-2353 and GNU-2377 detected by RDP4 software.
Recombination Detection Program V4.45, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
recombination detection program v4.45 - by Bioz Stars, 2026-09
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90
Simplot Science recombination detection program rdp4
Genetic <t> recombination </t> events of GNU-2353 and GNU-2377 detected by RDP4 software.
Recombination Detection Program Rdp4, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/recombination+detection+program/rdp4/10__1155_slash_2023_slash_9943040-46-17-24
Average 90 stars, based on 1 article reviews
recombination detection program rdp4 - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

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Recombination trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see <xref ref-type=Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis. " width="100%" height="100%">

Journal: Frontiers in Cellular and Infection Microbiology

Article Title: Isolation and characterization of an enterovirus G strain causing diarrhea and gut microbiota dysbiosis in piglets

doi: 10.3389/fcimb.2025.1699507

Figure Lengend Snippet: Recombination trend analysis of EV-G Epidemic Strains. Recombination events among the twenty-eight EV-G strains (see Figure 2 ) were analyzed using RDP software. Seventeen high-confidence events, consistently identified by all seven algorithms (RDP, GENECONV, BootScan, MaxChi, Chimaera, SiScan, and 3Seq), were selected for further characterization. Their recombination maps are displayed below, aligned with a reference EVG-SH-2024 ( PV984503 ) genome schematic for comparative analysis.

Article Snippet: Recombination detection program (RDP) analysis of the full-length EVG-SH-2024 genome, together with other EV-G sequences, indicated close relatedness to strain 13-03212/United States/2014 ( KF985175 ) in the genomic region spanning nt 1, 318–3, 830, as determined by SimPlot/SIScan analysis (P ≤ 7.468 × 10 -30 ) ( ).

Techniques: Software

Genetic  recombination  events of GNU-2353 and GNU-2377 detected by RDP4 software.

Journal: Transboundary and Emerging Diseases

Article Title: Comparative Genomic and Biological Investigation of NADC30- and NADC34-Like PRRSV Strains Isolated in South Korea

doi: 10.1155/tbed/9015349

Figure Lengend Snippet: Genetic recombination events of GNU-2353 and GNU-2377 detected by RDP4 software.

Article Snippet: Potential recombination events were analyzed using recombination detection program (RDP), SimPlot, and phylogeny, as described previously [ ].

Techniques: Software